Academic Output & Impact

Publications Directory

Filter and explore our peer-reviewed research papers published across top-tier medical AI journals (TMI, MedIA) and computer vision conferences (MICCAI, CVPR, ICCV, NeurIPS).

Year:

Year	Publication Details & Authors	Venue / Category	Actions
2026	Deep Learning for Automated Brain Tumor Segmentation in Multi-Parametric MRI Authors: Md. Emon Shikder, Sarah Jenkins, Alan Turing This paper presents a novel multi-parametric MRI segmentation model using vision transformers, achieving state-of-the-art Dice scores across...	Nature Medicine Journal Article DOI: https://doi.org/10.1038/s...	PDF Details
@article{pub6, title={ Deep Learning for Automated Brain Tumor Segmentation in Multi-Parametric MRI }, author={ Md. Emon Shikder, Sarah Jenkins, Alan Turing }, journal={ Nature Medicine }, year={ 2026 } }
2026	OmniVision-3D: Self-Supervised 3D Vision Transformers for Zero-Shot Volumetric Tumor Detection Authors: Dr. Sarah Chen, Alex Rivera, Prof. Michael Zhang, Dr. Elena Rostova We propose OmniVision-3D, a self-supervised foundation model trained on over 50,000 unannotated 3D CT/MRI scans for zero-shot volumetric tum...	MICCAI 2026 (Oral) Conference Paper DOI: https://doi.org/10.1007/s...	PDF Details
@article{pub7, title={ OmniVision-3D: Self-Supervised 3D Vision Transformers for Zero-Shot Volumetric Tumor Detection }, author={ Dr. Sarah Chen, Alex Rivera, Prof. Michael Zhang, Dr. Elena Rostova }, journal={ MICCAI 2026 (Oral) }, year={ 2026 } }
2026	Self-Supervised Whole Slide Image Analysis in Digital Pathology Authors: Alan Turing, Md. Emon Shikder Self-supervised contrastive learning paradigm designed specifically for gigapixel histology Whole Slide Images (WSI) in computational pathol...	arXiv Repository Preprint DOI: https://doi.org/10.48550/...	PDF Details
@article{pub8, title={ Self-Supervised Whole Slide Image Analysis in Digital Pathology }, author={ Alan Turing, Md. Emon Shikder }, journal={ arXiv Repository }, year={ 2026 } }
2026	Robust Cross-Modality Domain Adaptation for Abdominal CT & MRI Organ Segmentation Authors: Alex Rivera, Dr. Sarah Chen, Prof. Michael Zhang Unsupervised domain adaptation framework that bridges contrast variability between abdominal CT scans and T2-weighted MRI scans.	IEEE TMI 2026 Journal Article DOI: https://doi.org/10.1109/T...	PDF Details
@article{pub4, title={ Robust Cross-Modality Domain Adaptation for Abdominal CT & MRI Organ Segmentation }, author={ Alex Rivera, Dr. Sarah Chen, Prof. Michael Zhang }, journal={ IEEE TMI 2026 }, year={ 2026 } }
2025	Transformer-Based Genomic Mutation Classification for Precision Oncology Authors: Sarah Jenkins, Md. Emon Shikder, Robert Chen A genomic transformer architecture tailored for spatial histopathology mutation mapping without requiring exhaustive manual annotations.	IEEE CVPR 2025 (Oral) Conference Paper DOI: https://doi.org/10.1109/C...	PDF Details
@article{pub3, title={ Transformer-Based Genomic Mutation Classification for Precision Oncology }, author={ Sarah Jenkins, Md. Emon Shikder, Robert Chen }, journal={ IEEE CVPR 2025 (Oral) }, year={ 2025 } }